ML tree Pygmy Rain Frog (Pristimantis ridens)

From IPhylo

inferred using PAUP using maximum likelihood published in Doi:10.1016/j.ympev.2008.02.021. ML tree Pygmy Rain Frog (Pristimantis ridens) Doi:10.1016/j.ympev.2008.02.021 Tree5692

OTUs

OTUs contained in this tree:

• Tree5692/T97324 (Pristimantis ridens V Cacao DL677 CR)
• Tree5692/T97325 (Pristimantis ridens Upala AJC0496 CR)
• Tree5692/T97326 (Pristimantis ridens Turrialba AJC0526 CR)
• Tree5692/T97327 (Pristimantis ridens Tinamaste AJC0388 CR)
• Tree5692/T97328 (Pristimantis ridens Tilaran FB4076 CR)
• … further results

Warning: Invert-property fails here, is it because we have multiple "references" when we have >1 GenBank sequence for the same OTU?

Georeferencing

One OTU per line, coordinates from georeferenced GenBank sequence, via references property of OTU. Output to be used as input into GeoPhylo Engine

Pristimantis ridens V Cacao DL677 CR,10.923,-85.467
Pristimantis ridens Upala AJC0496 CR,10.811,-85.142
Pristimantis ridens Turrialba AJC0526 CR,10.125,-83.717
Pristimantis ridens Tinamaste AJC0388 CR,9.295,-83.767
Pristimantis ridens Tilaran FB4076 CR,10.92,-85.37
 … further results

NEXUS

This section contains one or more NEXUS blocks that add additional information to this tree.

BLOCK NOTES;

[Alternative names for taxa based on taxonomic concept that they belong to.]

ALTTAXNAMES taxonomic_concept=

'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis aff. cruentus AJC-2008' 'Pristimantis ridens' 'Pristimantis cruentus' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis pirrensis' 'Pristimantis aff. ridens AJC-2008' 'Pristimantis aff. ridens AJC-2008' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis museosus' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Craugastor noblei' 'Pristimantis ridens' 'Pristimantis pardalis' 'Pristimantis ridens' 'Pristimantis cruentus' 'Pristimantis ridens' 'Pristimantis cruentus' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis cerasinus' 'Pristimantis ridens' 'Pristimantis aff. ridens C AJC-2008' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis altae' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens' 'Pristimantis ridens'

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END;

Tree