![]() | Mitochondrial phylogeography of Rana (Pelophylax) populations in the Eastern Mediterranean region. is a journal article Molecular phylogenetics and evolution 44: 115 (2007)P Lymberakis N Poulakakis G Manthalou C S Tsigenopoulos A Magoulas M Mylonas |
Tags
Rana Pelophylax Phylogeny Phylogeography Cytochrome b 16S rRNA East MediterraneanPhylogenetic relationships in the western fraction of Rana (Pelophylax) have not been resolved till now, even though several works have been devoted to the subject. Here, we infer phylogenetic relationships among the species distributed in the area of the Eastern Mediterranean, comparing partial mitochondrial DNA sequences for the cytochrome b and 16S rRNA genes. The obtained molecular data clearly indicate that Western Palearctic water frogs underwent a basal radiation into at least 3 major lineages (the perezi, the lessonae, and the rindibunda/bedriagae lineages) advocating an upper Miocene speciation. Moreover, we consider that within the rindibunda/bedriagae lineage, R. (P.) ridibunda, R. (P.) epeirotica, R. (P.) cretensis, R. (P.) bedriagae, R. (P.) cerigensis and R. (P.) kurtmuelleri were differentiated from a common ancestor through a series of vicariant and dispersal events, during the last 5Mya, even though the specific rank of some taxa may be questionable, such as R. cerigensis in respect with R. bedriagae and R. kurtmuelleri in respect with R. ridibunda.
Shares data with 7
Articles that share data with this article.- Climatic oscillations triggered post-Messinian speciation of Western Palearctic brown frogs (Amphibia, Ranidae)
- Endemic ranid (Amphibia: Anura) genera in southern mountain ranges of the Indian subcontinent represent ancient frog lineages: evidence from molecular data
- Follicular lymphomas' BCL-2/IgH junctions contain templated nucleotide insertions: novel insights into the mechanism of t(14;18) translocation
- Molecular Phylogenetic Relationships of Pond Frogs Distributed in the Palearctic Region Inferred from DNA Sequences of Mitochondrial 12S Ribosomal RNA and Cytochrome b Genes
- Notes on a discrepancy in mitochondrial DNA and allozyme differentiation in a pond frog Rana nigromaculata
- Out of Asia: mitochondrial DNA evidence for an Oriental origin of tiger frogs, genus Hoplobatrachus.
- Phylogeny of Raninae (Anura: Ranidae) inferred from mitochondrial and nuclear sequences.
Cites 42
Articles cited by this article (note that only articles are online and known to the bioGUID OpenURL resolver will be listed here).- The general stochastic model of nucleotide substitution
- A Phylogeny for the African Treefrog Family Hyperoliidae Based on Mitochondrial rDNA
- Phylogenetic relationships and biogeography of Podarcis species from the Balkan Peninsula, by bayesian and maximum likelihood analyses of mitochondrial DNA sequences.
- Phylogeography of Balkan wall lizard (Podarcis taurica) and its relatives inferred from mitochondrial DNA sequences
- Phylogenetic relationships and evolutionary history of snake-eyed skink Ablepharus kitaibelii (Sauria: Scincidae).
- Molecular phylogeny and biogeography of the wall-lizard Podarcis erhardii (Squamata: Lacertidae).
- MODELTEST: testing the model of DNA substitution
- Model Selection and Model Averaging in Phylogenetics: Advantages of Akaike Information Criterion and Bayesian Approaches Over Likelihood Ratio Tests
- Divergence in mitochondrial DNA of Near Eastern water frogs with special reference to the systematic status of Cypriote and Anatolian populations (Anura, Ranidae)
- MrBayes 3: Bayesian phylogenetic inference under mixed models
- r8s: inferring absolute rates of molecular evolution and divergence times in the absence of a molecular clock
- Multiple overseas dispersal in amphibians
- Palaeoclimatic changes explain Anatolian mountain frog evolution: a test for alternating vicariance and dispersal events
- Climatic oscillations triggered post-Messinian speciation of Western Palearctic brown frogs (Amphibia, Ranidae)
- Molecular Phylogenetic Relationships of Pond Frogs Distributed in the Palearctic Region Inferred from DNA Sequences of Mitochondrial 12S Ribosomal RNA and Cytochrome b Genes
- Evaluating the Performance of a Successive-Approximations Approach to Parameter Optimization in Maximum-Likelihood Phylogeny Estimation
- Guest Editorial: Dispersal Versus Vicariance-No Contest!
- Natural Interspecies Transfer of Mitochondrial DNA in Amphibians
- Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference
- Phylogeography of Iurus dufoureius (Brulle, 1832) (Scorpiones, Iuridae)
- Mitochondrial DNA phylogeny and morphological diversity in the genus Mastus (Beck, 1837): a study in a recent (Holocene) island group (Koufonisi, south-east Crete)
- TESTING SIGNIFICANCE OF INCONGRUENCE
- Mitochondrial Phylogeography of the Land Snail Albinaria in Crete: Long- Term Geolgoical and Short-Term Vicariance Effects
- A hAT-related family of interspersed repetitive elements in genomes of western Palaearctic water frogs
- Mitochondrial DNA Rates and Biogeography in European Newts (Genus Euproctus)
- Phylogenetic systematics of the Rana signata complex of Philippine and Bornean stream frogs: reconsideration of Huxley's modification of Wallace's Line at the Oriental-Australian faunal zone interface
- BRANCH SUPPORT AND TREE STABILITY
- Amphibians as Indicators of Early Tertiary "Out-of-India" Dispersal of Vertebrates
- Geologically Dated Sea Barriers Calibrate a Protein Clock for Aegean Water Frogs
- Intraspecific Phylogeography: The Mitochondrial DNA Bridge Between Population Genetics and Systematics
- Evolutionary trees from DNA sequences: A maximum likelihood approach
- Confidence Limits on Phylogenies: An Approach Using the Bootstrap
- Model for the origin of the Troodos massif, Cyprus, and other mideast ophiolites
- Phylogenetic relationships of toads in the Bufo bufo species group from the eastern escarpment of the Tibetan Plateau: a case of vicariance and dispersal.
- Out of Asia: mitochondrial DNA evidence for an Oriental origin of tiger frogs, genus Hoplobatrachus.
- The biogeographical relations of the frogs and snakes of Sundaland
- MRBAYES: Bayesian inference of phylogenetic trees
- Mitochondrial DNA reveals formation of nonhybrid frogs by natural matings between hemiclonal hybrids
- Phylogeny of the New World true frogs ()
- Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
- The rate of DNA evolution: Effects of body size and temperature on the molecular clock
- A new look at the statistical model identification
Taxon/gene matrix
Table lens view of sequences, grouped by taxon and gene feature. Click on accession number to see details for sequence. Note that if more than one sequence exists for the same gene for the same taxon, only one will be displayed here.Features
Sequence features (such as genes) in this study
cytb cytochrome b 16S ribosomal RNA t(14;18) direct breakpoint BCL-2/JH6 gene fusion gyrB gyrase BTaxa
Taxa sequenced in thius study
Rana kurtmuelleri Rana ridibunda Rana bedriagae Rana cerigensis Homo sapiens Rana cretensis Rana epeirotica Rana saharica Rana lessonae Helicobacter pylori Rana esculenta Rana perezi Rana nigromaculata Rana fukienensis Rana plancyi Rana porosa brevipoda Rana porosa porosa Rana catesbeianaSequences 135
Sequences cited by this article.- DQ474200
- DQ474195
- DQ474143
- DQ474194
- DQ474142
- AY147937
- AY147957
- AF215422
- AY014392
- DQ474193
- DQ474144
- DQ474196
- DQ474148
- DQ474199
- DQ474147
- DQ474198
- DQ474146
- DQ474197
- DQ474145
- AF147979
- AF215420
- DQ474141
- DQ474192
- DQ474186
- DQ474134
- DQ474185
- DQ474133
- DQ474184
- DQ474132
- DQ474183
- DQ474131
- DQ474182
- DQ474135
- DQ474187
- DQ474140
- DQ474191
- DQ474139
- DQ474190
- DQ474138
- DQ474189
- DQ474137
- DQ474188
- DQ474136
- DQ474130
- DQ474232
- AB084047
- AB029943
- AB029942
- AY147982
- AY043051
- AY322276
- AY057099
- AF215426
- AY147984
- AB029944
- AY043052
- DQ474180
- AB029938
- AB029940
- AF274930
- AF205088
- AB029941
- AY322278
- AY315757
- AY147985
- DQ474231
- DQ474179
- AY147980
- AF215423
- DQ474204
- DQ474152
- DQ474203
- DQ474151
- DQ474202
- DQ474150
- DQ474201
- DQ474153
- DQ474205
- DQ474230
- DQ474178
- DQ474229
- DQ474177
- AY147981
- DQ474207
- DQ474155
- DQ474206
- DQ474154
- DQ474149
- DQ474181
- DQ474208
- DQ474156
- DQ474129
- DQ474228
- DQ474176
- DQ474227
- DQ474175
- DQ474226
- DQ474174
- DQ474225
- DQ474173
- DQ474224
- DQ474160
- DQ474212
- AB029945
- AY043067
- AY043049
- DQ474215
- DQ474163
- DQ474214
- DQ474162
- DQ474213
- DQ474161
- DQ474172
- DQ474223
- DQ474217
- DQ474165
- DQ474216
- DQ474164
- DQ474211
- DQ474159
- DQ474210
- DQ474158
- DQ474209
- DQ474166
- DQ474218
- DQ474171
- DQ474222
- DQ474170
- DQ474221
- DQ474169
- DQ474220
- DQ474168
- DQ474219
- DQ474167
- DQ474157
